Browsing by Autor "Jonathan A. Myers"

Now showing 1 - 10 of 10

Amazonian and Andean tree communities are not tracking current climate warming
(National Academy of Sciences, 2025) William Farfán-Ríos; Kenneth J. Feeley; Jonathan A. Myers; J. Sebastián Tello; Jhonatan Sallo‐Bravo; Yadvinder Malhi; Oliver L. Phillips; Timothy R. Baker; Alex Nina; Karina García‐Cabrera
Climate change is shifting species distributions, leading to changes in community composition and novel species assemblages worldwide. However, the responses of tropical forests to climate change across large-scale environmental gradients remain largely unexplored. Using long-term data over 66,000 trees of more than 2,500 species occurring over 3,500 m elevation along the hyperdiverse Amazon-to-Andes elevational gradients in Peru and Bolivia, we assessed community-level shifts in species composition over a 40+ y time span. We tested the thermophilization hypothesis, which predicts an increase in the relative abundances of species from warmer climates through time. Additionally, we examined the relative contributions of tree mortality, recruitment, and growth to the observed compositional changes. Mean thermophilization rates (TR) across the Amazon-to-Andes gradient were slow relative to regional temperature change. TR were positive and more variable among Andean forest plots compared to Amazonian plots but were highest at midelevations around the cloud base. Across all elevations, TR were driven primarily by tree mortality and decreased growth of highland (cool-adapted) species rather than an influx of lowland species with higher thermal optima. Given the high variability of community-level responses to warming along the elevational gradients, the high tree mortality, and the slower-than-warming rates of compositional change, we conclude that most tropical tree species, and especially lowland Amazonian tree species, will not be able to escape current or future climate change through upward range shifts, causing fundamental changes to composition and function in Earth's highest diversity forests.
Beta‐diversity in temperate and tropical forests reflects dissimilar mechanisms of community assembly
(Wiley, 2012) Jonathan A. Myers; Jonathan M. Chase; Iván Jiménez; Peter M. Jørgensen; Alejandro Araujo‐Murakami; Narel Y. Paniagua-Zambrana; Renate Seidel
Site-to-site variation in species composition (β-diversity) generally increases from low- to high-diversity regions. Although biogeographical differences in community assembly mechanisms may explain this pattern, random sampling effects can create this pattern through differences in regional species pools. Here, we compared assembly mechanisms between spatially extensive networks of temperate and tropical forest plots with highly divergent species pools (46 vs. 607 species). After controlling for sampling effects, β-diversity of woody plants was similar and higher than expected by chance in both forests, reflecting strong intraspecific aggregation. However, different mechanisms appeared to explain aggregation in the two forests. In the temperate forest, aggregation reflected stronger environmental correlations, suggesting an important role for species-sorting (e.g. environmental filtering) processes, whereas in the tropics, aggregation reflected stronger spatial correlations, more likely reflecting dispersal limitation. We suggest that biogeographical differences in the relative importance of different community assembly mechanisms contribute to these striking gradients in global biodiversity.
Ecological metabolomics of tropical tree communities across an elevational gradient: Implications for chemically-mediated biotic interactions and species diversity
(2023) D. Henderson; Brian E. Sedio; J. Sebastián Tello; Leslie Cayola; A C.; Belen Alvestegui; Nathan Muchhala; Jonathan A. Myers
Abstract Seminal hypotheses in ecology and evolution postulate that stronger and more specialized biotic interactions contribute to higher species diversity at lower elevations and latitudes. Plant-chemical defenses mediate biotic interactions between plants and their natural enemies and provide a highly dimensional trait space in which chemically mediated niches may facilitate plant species coexistence. However, the role of chemically mediated biotic interactions in shaping plant communities remains largely untested across large-scale ecological gradients. To test this hypothesis, we used ecological metabolomics to quantify the chemical dissimilarity of foliar metabolomes among 473 tree species (906 unique species-plot combinations) in 16 tropical tree communities along an elevational gradient in Madidi National Park, Bolivia. We predicted that chemical dissimilarity among co-occurring tree species would be greater, and chemical phylogenetic signal lower, in communities with greater tree species richness and warmer, wetter, and less-seasonal climates, as pressure from natural enemies is likely to be greater in these locales. Further, we predicted that these relationships should be especially pronounced for secondary metabolites derived from biosynthetic pathways known to include anti-herbivore and antimicrobial defenses than for primary metabolites. We found that median chemical dissimilarity among tree species with respect to all metabolites and secondary metabolites increased with tree species richness, decreased with elevation, and increased along a principal component of climatic variation that reflected increasing temperature and precipitation and decreasing seasonality. In contrast, median chemical dissimilarity among tree species with respect to primary metabolites was unrelated to tree species richness, elevation, or the principal component of climatic variation. Furthermore, phylogenetic signal of secondary and primary metabolites decreased with tree species richness. Among tree communities in moist forests, phylogenetic signal of secondary metabolites also increased with elevation and decreased with the temperature and precipitation. Our results support the hypothesis that chemically mediated biotic interactions shape elevational diversity gradients by imposing stronger selection for interspecific divergence in plant chemical defenses in warmer, wetter, and more stable climates. Our study also illustrates the promise of ecological metabolomics in the study of biogeography, community ecology, and complex species interactions in high-diversity ecosystems.
Elevational Gradients in β-Diversity Reflect Variation in the Strength of Local Community Assembly Mechanisms across Spatial Scales
(Public Library of Science, 2015) J. Sebastián Tello; Jonathan A. Myers; Manuel J. Macía; A C.; Leslie Cayola; Gabriel Arellano; M. Isabel Loza; Vania Torrez; Maritza Cornejo; Tatiana B. Miranda
Despite long-standing interest in elevational-diversity gradients, little is known about the processes that cause changes in the compositional variation of communities (β-diversity) across elevations. Recent studies have suggested that β-diversity gradients are driven by variation in species pools, rather than by variation in the strength of local community assembly mechanisms such as dispersal limitation, environmental filtering, or local biotic interactions. However, tests of this hypothesis have been limited to very small spatial scales that limit inferences about how the relative importance of assembly mechanisms may change across spatial scales. Here, we test the hypothesis that scale-dependent community assembly mechanisms shape biogeographic β-diversity gradients using one of the most well-characterized elevational gradients of tropical plant diversity. Using an extensive dataset on woody plant distributions along a 4,000-m elevational gradient in the Bolivian Andes, we compared observed patterns of β-diversity to null-model expectations. β-deviations (standardized differences from null values) were used to measure the relative effects of local community assembly mechanisms after removing sampling effects caused by variation in species pools. To test for scale-dependency, we compared elevational gradients at two contrasting spatial scales that differed in the size of local assemblages and regions by at least an order of magnitude. Elevational gradients in β-diversity persisted after accounting for regional variation in species pools. Moreover, the elevational gradient in β-deviations changed with spatial scale. At small scales, local assembly mechanisms were detectable, but variation in species pools accounted for most of the elevational gradient in β-diversity. At large spatial scales, in contrast, local assembly mechanisms were a dominant force driving changes in β-diversity. In contrast to the hypothesis that variation in species pools alone drives β-diversity gradients, we show that local community assembly mechanisms contribute strongly to systematic changes in β-diversity across elevations. We conclude that scale-dependent variation in community assembly mechanisms underlies these iconic gradients in global biodiversity.
Historical Assembly of Andean Tree Communities
(Multidisciplinary Digital Publishing Institute, 2023) Sebastian González‐Caro; J. Sebastián Tello; Jonathan A. Myers; Kenneth J. Feeley; Cecilia Blundo; Marco Calderón-Loor; Julieta Carilla; Leslie Cayola; Francisco Cuesta; William Farfán-Ríos
Patterns of species diversity have been associated with changes in climate across latitude and elevation. However, the ecological and evolutionary mechanisms underlying these relationships are still actively debated. Here, we present a complementary view of the well-known tropical niche conservatism (TNC) hypothesis, termed the multiple zones of origin (MZO) hypothesis, to explore mechanisms underlying latitudinal and elevational gradients of phylogenetic diversity in tree communities. The TNC hypothesis posits that most lineages originate in warmer, wetter, and less seasonal environments in the tropics and rarely colonize colder, drier, and more seasonal environments outside of the tropical lowlands, leading to higher phylogenetic diversity at lower latitudes and elevations. In contrast, the MZO hypothesis posits that lineages also originate in temperate environments and readily colonize similar environments in the tropical highlands, leading to lower phylogenetic diversity at lower latitudes and elevations. We tested these phylogenetic predictions using a combination of computer simulations and empirical analyses of tree communities in 245 forest plots located in six countries across the tropical and subtropical Andes. We estimated the phylogenetic diversity for each plot and regressed it against elevation and latitude. Our simulated and empirical results provide strong support for the MZO hypothesis. Phylogenetic diversity among co-occurring tree species increased with both latitude and elevation, suggesting an important influence on the historical dispersal of lineages with temperate origins into the tropical highlands. The mixing of different floras was likely favored by the formation of climatically suitable corridors for plant migration due to the Andean uplift. Accounting for the evolutionary history of plant communities helps to advance our knowledge of the drivers of tree community assembly along complex climatic gradients, and thus their likely responses to modern anthropogenic climate change.
Mechanisms of community assembly explaining beta‐diversity patterns across biogeographic regions
(Wiley, 2021) Miguel Muñoz Mazón; J. Sebastián Tello; Manuel J. Macía; Jonathan A. Myers; Peter M. Jørgensen; Victoria Cala Rivero; Alfredo F. Fuentes; Vania Torrez; Gabriel Arellano
Abstract Aim We examined tree beta diversity in four biogeographical regions with contrasting environmental conditions, latitude, and diversity. We tested: (a) the influence of the species pool on beta diversity; (b) the relative contribution of niche‐based and dispersal‐based assembly to beta diversity; and (c) differences in the importance of these two assembly mechanisms in regions with differing productivity and species richness. Location Lowland and montane tropical forests in the Madidi region (Bolivia), lowland temperate forests in the Ozarks (USA), and montane temperate forests in the Cantabrian Mountains (Spain). Methods We surveyed woody plants with a diameter ≥2.5 cm following a standardized protocol in 236 0.1‐ha forest plots in four different biogeographical regions. We estimated the species pool at each region and used it to recreate null communities determined entirely by the species pool. Observed patterns of beta diversity smaller or greater than the null‐expected patterns of beta diversity implies the presence of local assembly mechanisms beyond the influence of the species pool. We used variation‐partitioning analyses to compare the contribution of niche‐based and dispersal‐based assembly to patterns of observed beta diversity and their deviations from null models among the four regions. Results (a) Differences in species pools alone did not explain observed differences in beta diversity among biogeographic regions. (b) In 3/4 regions, the environment explained more of the variation in beta diversity than spatial variables. (c) Spatial variables explained more of the beta diversity in more diverse and more productive regions with more rare species (tropical and lower‐elevation regions) compared to less diverse and less productive regions (temperate and higher‐elevation regions). (d) Greater alpha or gamma diversity did not result in higher beta diversity or stronger correlations with the environment. Conclusion Overall, the observed differences in beta diversity are better explained by differences in community assembly mechanism than by biogeographical processes that shaped the species pool.
Testing the role of biotic interactions in shaping elevational diversity gradients: An ecological metabolomics approach
(Wiley, 2025) D. Henderson; J. Sebastián Tello; Leslie Cayola; A C.; Belen Alvestegui; Nathan Muchhala; Brian E. Sedio; Jonathan A. Myers
Seminal hypotheses in ecology and evolution postulate that stronger and more specialized biotic interactions contribute to higher species diversity at lower elevations and latitudes. Plant-chemical defenses mediate biotic interactions between plants and their natural enemies and provide a highly dimensional trait space in which chemically mediated niches may facilitate plant species coexistence. However, the role of chemically mediated biotic interactions in shaping plant communities remains largely untested across large-scale ecological gradients. Here, we used ecological metabolomics to quantify the chemical dissimilarity of foliar metabolomes among 473 tree species in 16 tropical tree communities along an elevational gradient in the Bolivian Andes. We predicted that tree species diversity would be higher in communities and climates where co-occurring tree species are more chemically dissimilar and exhibit faster evolution of secondary metabolites (lower chemical phylogenetic signal). Further, we predicted that these relationships should be especially pronounced for secondary metabolites known to include antiherbivore and antimicrobial defenses relative to primary metabolites. Using structural equation models, we quantified the direct effects of rarefied median chemical dissimilarity and chemical phylogenetic signal on tree species diversity, as well as the indirect effects of climate. We found that chemical dissimilarity among tree species with respect to all metabolites and secondary metabolites had positive direct effects on tree species diversity, and that climate (higher temperature and precipitation, and lower temperature seasonality) had positive indirect effects on species diversity by increasing chemical dissimilarity. In contrast, chemical dissimilarity of primary metabolites was unrelated to species diversity and climate. Chemical phylogenetic signal of all metabolite classes had negative direct effects on tree species diversity, indicating faster evolution of metabolites in more diverse communities. Climate had a direct effect on species diversity but did not indirectly affect diversity through chemical phylogenetic signal. Our results support the hypothesis that chemically mediated biotic interactions shape elevational diversity gradients by imposing stronger selection for chemical divergence in more diverse communities and maintaining higher chemical dissimilarity among species in warmer, wetter, and more stable climates. Our study also illustrates the promise of ecological metabolomics in the study of biogeography, community ecology, and complex species interactions in high-diversity ecosystems.
The evolutionary assembly of forest communities along environmental gradients: recent diversification or sorting of pre-adapted clades?
(2020) Alexander G. Linan; Jonathan A. Myers; Christine E. Edwards; Amy E. Zanne; Stephen A. Smith; Gabriel Arellano; Leslie Cayola; William Farfán-Ríos; A C.; Karina García‐Cabrera
Summary Biogeographic events occurring in the deep past can contribute to the structure of modern ecological communities. However, little is known about how the emergence of environmental gradients shape the evolution of species that underlie community assembly. In this study, we address how the creation of novel environments lead to community assembly via two non-mutually exclusive processes: 1) the immigration and ecological sorting of pre-adapted clades (ISPC), and 2) recent adaptive diversification (RAD). We study these processes in the context of the elevational gradient created by the uplift of the Central Andes. We develop a novel approach and method based on the decomposition of species turnover into within- and among-clade components, where clades correspond to lineages that originated before mountain uplift. Effects of ISPC and RAD can be inferred from how components of turnover change with elevation. We test our approach using data from over 500 Andean forest plots. We found that species turnover between communities at different elevations is dominated by the replacement of clades that originated before the uplift of the Central Andes. Our results suggest that immigration and sorting of clades pre-adapted to montane habitats is the primary mechanism shaping communities across elevations.
The evolutionary assembly of forest communities along environmental gradients: recent diversification or sorting of pre‐adapted clades?
(Wiley, 2021) Alexander G. Linan; Jonathan A. Myers; Christine E. Edwards; Amy E. Zanne; Stephen A. Smith; Gabriel Arellano; Leslie Cayola; William Farfán-Ríos; A C.; Karina García‐Cabrera
Recent studies have demonstrated that ecological processes that shape community structure and dynamics change along environmental gradients. However, much less is known about how the emergence of the gradients themselves shape the evolution of species that underlie community assembly. In this study, we address how the creation of novel environments leads to community assembly via two nonmutually exclusive processes: immigration and ecological sorting of pre-adapted clades (ISPC), and recent adaptive diversification (RAD). We study these processes in the context of the elevational gradient created by the uplift of the Central Andes. We develop a novel approach and method based on the decomposition of species turnover into within- and among-clade components, where clades correspond to lineages that originated before mountain uplift. Effects of ISPC and RAD can be inferred from how components of turnover change with elevation. We test our approach using data from over 500 Andean forest plots. We found that species turnover between communities at different elevations is dominated by the replacement of clades that originated before the uplift of the Central Andes. Our results suggest that immigration and sorting of clades pre-adapted to montane habitats is the primary mechanism shaping tree communities across elevations.
Untangling the importance of niche breadth and niche position as drivers of tree species abundance and occupancy across biogeographic regions
(Wiley, 2020) Dilys M. Vela Díaz; Cecilia Blundo; Leslie Cayola; Alfredo F. Fuentes; Lucio R. Malizia; Jonathan A. Myers
Abstract Aim Ecological niches shape species commonness and rarity, yet, the relative importance of different niche mechanisms within and across ecosystems remains unresolved. We tested the influence of niche breadth (range of environmental conditions where species occur) and niche position (marginality of a species’ environmental distribution relative to the mean environmental conditions of a region) on tree‐species abundance and occupancy across three biogeographic regions. Location Argentinian Andes; Bolivian Amazon; Missouri Ozarks. Time period 2002–2010. Major taxa studied Trees. Methods We calculated abiotic‐niche breadths and abiotic‐niche positions using 16 climate, soil and topographic variables. For each region, we used model selection to test the relative influence of niche breadth and niche position on local abundance and occupancy in regional‐scale networks of 0.1‐ha forest plots. To account for species–environment associations caused by other mechanisms (e.g., dispersal), we used null models that randomized associations between species occurrences and environmental variables. Results We found strong support for the niche‐position hypothesis. In all regions, species with higher local abundance and occupancy occurred in non‐marginal environments. Observed relationships between occupancy and niche position also differed from random species–environment associations in all regions. Surprisingly, we found little support for the niche‐breadth hypothesis. Observed relationships between both local abundance and niche breadth, and occupancy and niche breadth, did not differ from random species–environment associations. Main conclusion Niche position was more important than niche breadth in shaping species commonness and rarity across temperate, sub‐tropical and tropical forests. In all forests, tree species with widespread geographic distributions were associated with environmental conditions commonly found throughout the region, suggesting that niche position has similar effects on species occupancy across contrasting biogeographic regions. Our findings imply that conservation efforts aimed at protecting populations of common and rare tree species should prioritize conservation of both common and rare habitats.