David Urbina-GómezFlávia Vischi WinckBernd Müller‐RöberDiego Mauricio Riaño‐Pachón2026-03-222026-03-22201210.1038/npre.2012.7035.1https://doi.org/10.1038/npre.2012.7035.1https://andeanlibrary.org/handle/123456789/83915Abstract For the genome-wide identification of nucleosome depleted regions under carbon deprivation, we analyze an available set of data from an assay of formaldehyde-assisted isolation of regulatory elements followed by sequencing (FAIRE-seq). Mapping to the sequenced nuclear genome of C.reinhardtii, followed by the identification of the enrichment-sequenced fragments was performed. We examined the location of these fragments relative to annotated genes. The related genes were associated to the corresponding Gene-Ontology (GO), for an evaluation of over-representate GO categories. Some genes, link with functions or locations, that have been previous described, indicating the success of the method finding carbon-metabolism related fragments.enChlamydomonas reinhardtiiGeneComputational biologyGenomeGene ontologyBiologyIdentification (biology)Nuclear geneGeneticspreprint