An open CAR-T single-cell atlas to enable in-depth characterization and rational engineering of CAR-T products

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dc.contributor.authorSergio Camara-Peña
dc.contributor.authorPaula Rodríguez-Márquez
dc.contributor.authorNúria Planell
dc.contributor.authorMaría Eréndira Calleja-Cervantes
dc.contributor.authorLorea Jordana-Urriza
dc.contributor.authorGiacomo Cinnirella
dc.contributor.authorShlomit Reich-Zeliger
dc.contributor.authorPaula Rodriguez-Otero
dc.contributor.authorEsteban Tamariz
dc.contributor.authorIdoia Ochoa
dc.coverage.spatialBolivia
dc.date.accessioned2026-03-24T15:02:07Z
dc.date.available2026-03-24T15:02:07Z
dc.date.issued2026
dc.description.abstractThis record contains the datasets used in the manuscript to ensure full reproducibility of the results. Code and analysis workflows are available at: https://github.com/ML4BM-Lab/Functional-cart-atlas Pretrained atlas model is broadly available to the community through scVI-hub: https://huggingface.co/sergiocamarap/Functional-cart-atlas-model The atlas can be explored through an interactive Shiny application at: https://wholebioinfo.shinyapps.io/shinyatlas/ The atlas is also accessible through the UCSC Cell Browser at: https://car-t-atlas.cells.ucsc.edu Together, these resources provide an integrated framework to explore, validate, and extend the CAR-T cell atlas presented in the study.
dc.identifier.doi10.5281/zenodo.19066393
dc.identifier.urihttps://doi.org/10.5281/zenodo.19066393
dc.identifier.urihttps://andeanlibrary.org/handle/123456789/100820
dc.relation.ispartofZenodo (CERN European Organization for Nuclear Research)
dc.sourceFundación para el Desarrollo de la Ecología
dc.subjectAtlas (anatomy)
dc.subjectWorkflow
dc.subjectSource code
dc.subjectCode (set theory)
dc.subjectOpen source
dc.titleAn open CAR-T single-cell atlas to enable in-depth characterization and rational engineering of CAR-T products
dc.typedataset

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